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Coelho FJRC, Cleary DFR, Rocha RJM, et al. Unraveling the interactive effects of climate change and oil contamination on laboratory-simulated estuarine benthic communities. Glob Chang Biol. 2015;21(5):1871-86. doi:10.1111/gcb.12801
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Hardoim CCP, Costa R. Temporal dynamics of prokaryotic communities in the marine sponge Sarcotragus spinosulus. Mol Ecol. 2014;23(12):3097-112. doi:10.1111/mec.12789
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van Elsas JDirk, Semenov AV, Costa R, Trevors JT. Survival of Escherichia coli in the environment: fundamental and public health aspects. ISME J. 2011;5(2):173-83. doi:10.1038/ismej.2010.80
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Cúcio C, Engelen AH, Costa R, Muyzer G. Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific. Frontiers in Microbiology. 2016;7. doi:10.3389/fmicb.2016.00440
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Hardoim CCP, Esteves AIS, Pires FR, et al. Phylogenetically and spatially close marine sponges harbour divergent bacterial communities. PLoS One. 2012;7(12):e53029. doi:10.1371/journal.pone.0053029
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Califano G, Castanho S, Soares F, et al. Molecular Taxonomic Profiling of Bacterial Communities in a Gilthead Seabream (Sparus aurata) Hatchery. Frontiers in Microbiology. 2017;8. doi:10.3389/fmicb.2017.00204
Esteves AIS, Hardoim CCP, Xavier JR, Gonçalves JMS, Costa R. Molecular richness and biotechnological potential of bacteria cultured from Irciniidae sponges in the north-east Atlantic. FEMS Microbiol Ecol. 2013;85(3):519-36. doi:10.1111/1574-6941.12140
Hardoim CCP, Costa R. Microbial communities and bioactive compounds in marine sponges of the family irciniidae-a review. Mar Drugs. 2014;12(10):5089-122. doi:10.3390/md12105089
Marques M, Borges N, Silva SGodinho, et al. Metagenome-Assembled Genome Sequences of Three Uncultured Planktomarina sp. Strains from the Northeast Atlantic OceanABSTRACT. Stewart FJ, ed. Microbiology Resource Announcements. 2020;9(12). doi:10.1128/MRA.00127-20
Gomes NCM, Flocco CG, Costa R, et al. Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortia. FEMS Microbiol Ecol. 2010;74(2):276-90. doi:10.1111/j.1574-6941.2010.00962.x
Grueneberg J, Engelen AH, Costa R, Wichard T. Macroalgal Morphogenesis Induced by Waterborne Compounds and Bacteria in Coastal Seawater. Thomas T, ed. PLOS ONE. 2016;11(1):e0146307. doi:10.1371/journal.pone.0146307
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Pascoal F, Magalhães C, Costa R. The Link Between the Ecology of the Prokaryotic Rare Biosphere and Its Biotechnological Potential. Frontiers in Microbiology. 2020;11. doi:10.3389/fmicb.2020.00231
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Keller-Costa T, ben Silva R, Lago-Lestón A, Costa R. Genomic Insights into Aquimarina sp. Strain EL33, a Bacterial Symbiont of the Gorgonian Coral Eunicella labiata. Genome Announc. 2016;4(4). doi:10.1128/genomeA.00855-16
Karimi E, Keller-Costa T, Slaby BM, et al. Genomic blueprints of sponge-prokaryote symbiosis are shared by low abundant and cultivatable Alphaproteobacteria. Scientific reports. 2019;9:1999.
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Keller-Costa T, Jousset A, van Overbeek L, van Elsas JDirk, Costa R. The freshwater sponge Ephydatia fluviatilis harbours diverse Pseudomonas species (Gammaproteobacteria, Pseudomonadales) with broad-spectrum antimicrobial activity. PLoS One. 2014;9(2):e88429. doi:10.1371/journal.pone.0088429
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Costa R, Keller-Costa T, Gomes NCM, da Rocha UNunes, van Overbeek L, van Elsas JDirk. Evidence for selective bacterial community structuring in the freshwater sponge Ephydatia fluviatilis. Microb Ecol. 2013;65(1):232-44. doi:10.1007/s00248-012-0102-2
Hardoim CCP, Cardinale M, Cúcio ACB, et al. Effects of sample handling and cultivation bias on the specificity of bacterial communities in keratose marine sponges. Frontiers in Microbiology. 2014;5. doi:10.3389/fmicb.2014.00611
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Gonçalves ACS, Franco T, Califano G, Dowd SE, Pohnert G, Costa R. Draft Genome Sequence of Vibrio sp. Strain Vb278, an Antagonistic Bacterium Isolated from the Marine Sponge Sarcotragus spinosulus. Genome Announc. 2015;3(3). doi:10.1128/genomeA.00521-15
Karimi E, Gonçalves JMS, Reis M, Costa R. Draft Genome Sequence of Microbacterium sp. Strain Alg239_V18, an Actinobacterium Retrieved from the Marine Sponge Spongia spABSTRACT. Genome Announcements. 2017;5(3). doi:10.1128/genomeA.01457-16
Califano G, Franco T, Gonçalves ACS, et al. Draft Genome Sequence of Aliivibrio fischeri Strain 5LC, a Bacterium Retrieved from Gilthead Sea Bream (Sparus aurata) Larvae Reared in Aquaculture. Genome Announc. 2015;3(3). doi:10.1128/genomeA.00593-15
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Karimi E, Ramos M, Gonçalves JMS, Xavier JR, Reis MP, Costa R. Comparative Metagenomics Reveals the Distinctive Adaptive Features of the Spongia officinalis Endosymbiotic Consortium. Frontiers in Microbiology. 2017;8. doi:10.3389/fmicb.2017.02499
Alexandrino M, Costa R, Canario AVM, Costa MC. Clostridia initiate heavy metal bioremoval in mixed sulfidogenic cultures. Environ Sci Technol. 2014;48(6):3378-85. doi:10.1021/es4052044
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Alexandrino M, Macías F, Costa R, Gomes NCM, Canario AVM, Costa MC. A bacterial consortium isolated from an Icelandic fumarole displays exceptionally high levels of sulfate reduction and metals resistance. J Hazard Mater. 2011;187(1-3):362-70. doi:10.1016/j.jhazmat.2011.01.035